CDS

Accession Number TCMCG057C38388
gbkey CDS
Protein Id XP_018446045.1
Location complement(join(1042440..1043282,1044565..1044641,1044829..1044934,1045028..1045156,1045238..1045336,1045417..1045629,1045721..1045831,1045936..1045977))
Gene LOC108817756
GeneID 108817756
Organism Raphanus sativus

Protein

Length 539aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018590543.1
Definition PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category B
Description A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K02470        [VIEW IN KEGG]
EC 5.99.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003918        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009295        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0061505        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACGGCGGAAGAAGAGTATCACTCCAAGATATCAAAAGGGTTAAAGTTTCTATGGAAAGGGAGGTTGACGACCCCAAAAACAAGCTTTATAAAGAATGTTACTATGCTGGAGGCTCAAGCGAATATCTCACTTGCCTCAATCCTGATAAGAAACCACTTCATGAGGTGCTGGGTTTCAAAAAAGAGATGAATGGTATCATCATGGACATTGCACTTCAATGGTACGTTGATGGATACTCAGACACAATGCTAGGATATGCTAATGGCATCCGCACCAACGATGGTGGGACGCATATAGACGGTGTGAAAGCTTCGATAACAAGAACTCTTAACAACTTTGCGAAGAAGTCCAAGTTTCTCAAGGACGAGGATATTACTTTCAGTGGGAAGCATGTTAGGGAAGGACTGACTTGCGTTGTCTCAGTTATTGTTCCAAAGCCTGAGTTTGAAGGTCAAACACAGACGAGATTAGGGAATCCATATATCAGAGAAATTGTCGACCAATCAGTACAGATGTACTTAACGGAGTATTTTGAATTGCATCCAGATGTGCTTGAGAGCATTCTCTCCAAATCTTTGAACGCTTACAAGACTGCATTGGCTATGAAGAAGGCAAGAGATTTGATTAGATCAAGTAGTGTATCAATGCGGTGCACCATTCCTGAGAAACTGACCAACTGCTCTTCTGAAAAACGTGAGATCTCAATAGGCAGAGGAAATAGTTCTGGTGGCGCTGCAAAACATGGTCCTCGCTCTCTTGACAGGCGTTCCCAAAGCAAAAGGACGCGGGAACAGCCTTGGAGTGACGGTGCAGTCTTTACAATTCATGGCAAGTCGTCAGAGGACACTAGCGACTCTAGGTTTGAGAAGAAACGCCAAAAAGTTAAACCCTGTGTTCAATCCTCAAAACCCTGCTTTTCTTCACGGAAAACTGCTGCTGTTTCAGACCCACCAAACCGTAAACCTGCTGCTTCAAAACGACCAAACCGTACCGATGTTAGCGTCAAGACTTTGAATGGTGTAACCCCTGGTTCAGAAAAAACCAAACGTGCAGTTATCCCAGTAGGTGCTGTTTTCCAGGCTGAAATTCCTATTTGGATTGCGCCTACTAAGAAGGGAAAATTCTACGGTAGTCCCGGAGATTCCGACACTCTTAGGTGGCTAGGAACTGGTGTTTGGCCAACTTATAGCCTAAAGAAGAAAGCTCACTACAAAAAAGTAGGGGAAGGAAGAAAGGACACTTGTTCCTATGCTTCTTCAGGATCAACCAATTGCATAAAACAACACATTAAAGAAGCAAGGGAGCTTCTAGAGAAAGATATAGGGCGTGCTTTCTATACTTGGAAGTTTGATCAAATGGGTGAAGAAGTGGGATCAAAATCATGGACTGCCAAAGAAGAGCAAACGTTCAAAGCTCTTGTGAAAGCTAATCCTTTGCCAAGTAAGAAAGGATTTTGGAAACTAGCTTCCAAGGCTTTACCAAGGAAAAGTGAGAAGGATCTCACTAGTTACTACTATAATGTTTTCCTCATCAAACGTATGAGATTGCTTGCTAAGTCTCCTGCTGACAACATGGATAGTGATGATGACCAAAATGATAACTTCTTAGCTGGATGA
Protein:  
MYGGRRVSLQDIKRVKVSMEREVDDPKNKLYKECYYAGGSSEYLTCLNPDKKPLHEVLGFKKEMNGIIMDIALQWYVDGYSDTMLGYANGIRTNDGGTHIDGVKASITRTLNNFAKKSKFLKDEDITFSGKHVREGLTCVVSVIVPKPEFEGQTQTRLGNPYIREIVDQSVQMYLTEYFELHPDVLESILSKSLNAYKTALAMKKARDLIRSSSVSMRCTIPEKLTNCSSEKREISIGRGNSSGGAAKHGPRSLDRRSQSKRTREQPWSDGAVFTIHGKSSEDTSDSRFEKKRQKVKPCVQSSKPCFSSRKTAAVSDPPNRKPAASKRPNRTDVSVKTLNGVTPGSEKTKRAVIPVGAVFQAEIPIWIAPTKKGKFYGSPGDSDTLRWLGTGVWPTYSLKKKAHYKKVGEGRKDTCSYASSGSTNCIKQHIKEARELLEKDIGRAFYTWKFDQMGEEVGSKSWTAKEEQTFKALVKANPLPSKKGFWKLASKALPRKSEKDLTSYYYNVFLIKRMRLLAKSPADNMDSDDDQNDNFLAG